finish migration to pytest

7 months ago · d6d9e78e4d
parent 5926b50580
commit d6d9e78e4d
26 changed files with 20 additions and 38 deletions
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@ -11,10 +11,10 @@ Pyrocko uses Setuptools for its installation script. See `setup.py` and

 ## Testing

-Nosetests is used for testing. To run all tests, run
+Pytest is used for testing. To run all tests, run

 ```sh
-python -m nose test
+python -m pytest
 ```

 ## CI
--- a/doc/source/install/details.rst
+++ b/doc/source/install/details.rst
@ -33,7 +33,7 @@ installed from source:

 * Optional Python modules:
   * `Jinja2 <http://jinja.pocoo.org/>`_ (required for the :ref:`fomosto report <fomosto_report>` subcommand)
-   * `nosetests <https://pypi.python.org/pypi/nose>`_ (to run the unittests)
+   * `pytest <https://pytest.org>`_ (to run the unittests)
   * `coverage <https://pypi.python.org/pypi/coverage>`_ (unittest coverage report)

 * Manually install these optional software tools:
--- a/docker/nest/Dockerfile
+++ b/docker/nest/Dockerfile
@ -17,7 +17,7 @@ RUN apt-get install -y python3-dev python3-setuptools python3-numpy-dev

 # testing requirements
 RUN apt-get install -y xvfb libgles2-mesa
-RUN apt-get install -y python3-coverage python3-nose python3-pytest
+RUN apt-get install -y python3-coverage python3-pytest

 # base runtime requirements
 RUN apt-get install -y \
--- a/maintenance/pip/requirements-build-pip-cp310-cp310.txt
+++ b/maintenance/pip/requirements-build-pip-cp310-cp310.txt
@ -3,4 +3,3 @@ scipy
 pyyaml
 matplotlib
 requests
-nose
--- a/maintenance/pip/requirements-build-pip-cp311-cp311.txt
+++ b/maintenance/pip/requirements-build-pip-cp311-cp311.txt
@ -3,4 +3,3 @@ scipy
 pyyaml
 matplotlib
 requests
-nose
--- a/maintenance/pip/requirements-build-pip-cp37-cp37m.txt
+++ b/maintenance/pip/requirements-build-pip-cp37-cp37m.txt
@ -3,5 +3,4 @@ scipy
 pyyaml
 matplotlib
 requests
-nose
 PyOpenGL
--- a/maintenance/pip/requirements-build-pip-cp38-cp38.txt
+++ b/maintenance/pip/requirements-build-pip-cp38-cp38.txt
@ -3,5 +3,4 @@ scipy
 pyyaml
 matplotlib
 requests
-nose
 PyOpenGL
--- a/maintenance/pip/requirements-build-pip-cp39-cp39.txt
+++ b/maintenance/pip/requirements-build-pip-cp39-cp39.txt
@ -3,5 +3,4 @@ scipy
 pyyaml
 matplotlib
 requests
-nose
 PyOpenGL
--- a/maintenance/pip/test_wheels.sh
+++ b/maintenance/pip/test_wheels.sh
@ -1,7 +0,0 @@
-#!/bin/bash
-
-set -e
-
-pip3 install -r requirements-all.txt
-pip3 install -f wheels --no-index pyrocko
-python3 -m nose test.base.test_util test.base.test_eikonal
--- a/maintenance/vagrant/arch/inside.sh
+++ b/maintenance/vagrant/arch/inside.sh
@ -36,5 +36,5 @@ echo "backend : agg" > "$HOME/.config/matplotlib/matplotlibrc"
 python3 install.py deps system --yes && \
    python3 install.py system --yes && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/centos-7/inside.sh
+++ b/maintenance/vagrant/centos-7/inside.sh
@ -41,5 +41,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python install.py deps conda --yes && \
    python install.py user --yes && \
    python -m pyrocko.print_version deps >> "$outfile_py3" && \
-    python -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    python -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/centos-8/inside.sh
+++ b/maintenance/vagrant/centos-8/inside.sh
@ -37,5 +37,5 @@ pip3=/usr/bin/pip3
 "$python3" install.py deps system --yes && \
    sudo "$pip3" install --no-deps --force-reinstall --upgrade . && \
    "$python3" -m pyrocko.print_version deps >> "$outfile_py3" && \
-    "$python3" -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    "$python3" -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/debian-10/inside.sh
+++ b/maintenance/vagrant/debian-10/inside.sh
@ -38,5 +38,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    python3 install.py system --yes && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/debian-11/inside.sh
+++ b/maintenance/vagrant/debian-11/inside.sh
@ -38,5 +38,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    python3 install.py system --yes && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/debian-9/inside.sh
+++ b/maintenance/vagrant/debian-9/inside.sh
@ -38,5 +38,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    sudo pip3 install --no-deps --force-reinstall --upgrade . && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v  "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/osx/inside.sh
+++ b/maintenance/vagrant/osx/inside.sh
@ -60,10 +60,10 @@ conda install -y \
    pyyaml \
    requests \
    jinja2 \
-    nose
+    pytest

 python3 install.py deps conda --yes && \
    python3 install.py user --yes && \
    python3 -m pyrocko.print_version deps >> "$outfile" && \
-    python3 -m nose "$thetest" > >(tee -a "$outfile") 2> >(tee -a "$outfile" >&2) || \
+    python3 -m pytest -v "$thetest" > >(tee -a "$outfile") 2> >(tee -a "$outfile" >&2) || \
    /usr/bin/true
--- a/maintenance/vagrant/ubuntu-16.04/inside.sh
+++ b/maintenance/vagrant/ubuntu-16.04/inside.sh
@ -38,5 +38,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    sudo pip3 install --no-deps --force-reinstall --upgrade . && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/ubuntu-18.04/inside.sh
+++ b/maintenance/vagrant/ubuntu-18.04/inside.sh
@ -36,5 +36,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    sudo pip3 install --no-deps --force-reinstall --upgrade . && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/maintenance/vagrant/ubuntu-20.04/inside.sh
+++ b/maintenance/vagrant/ubuntu-20.04/inside.sh
@ -36,5 +36,5 @@ ln -s "/vagrant/example_run_dir" "test/example_run_dir"
 python3 install.py deps system --yes && \
    python3 install.py system --yes && \
    python3 -m pyrocko.print_version deps >> "$outfile_py3" && \
-    xvfb-run -s '-screen 0 640x480x24' python3 -m nose "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
+    xvfb-run -s '-screen 0 640x480x24' python3 -m pytest -v "$thetest" > >(tee -a "$outfile_py3") 2> >(tee -a "$outfile_py3" >&2) || \
    /bin/true
--- a/prerequisites/prerequisites_arch_python3.sh
+++ b/prerequisites/prerequisites_arch_python3.sh
@ -6,4 +6,4 @@ sudo pacman -Syu --noconfirm --needed \
    python-pyqt5 qt5-webengine qt5-svg qt5-webkit \
    python-cairo \
    python-requests python-yaml python-jinja \
-    python-nose python-coverage
+    python-pytest python-coverage
--- a/prerequisites/prerequisites_centos_python3.sh
+++ b/prerequisites/prerequisites_centos_python3.sh
@ -4,5 +4,5 @@ sudo yum -y install epel-release dnf-plugins-core
 sudo yum config-manager --set-enabled powertools

 sudo yum -y install make gcc patch git python3 python3-yaml python3-matplotlib python3-numpy \
-    python3-scipy python3-requests python3-coverage python3-nose python3-jinja2 \
+    python3-scipy python3-requests python3-coverage python3-pytest python3-jinja2 \
    python3-qt5 python3-matplotlib-qt5
--- a/prerequisites/prerequisites_debian_python3.sh
+++ b/prerequisites/prerequisites_debian_python3.sh
@ -6,4 +6,4 @@ sudo apt-get install -y make git python3-dev python3-setuptools python3-pip \
    python3-matplotlib python3-pyqt5 python3-pyqt5.qtopengl \
    python3-pyqt5.qtsvg python3-pyqt5.qtwebkit python3-yaml \
    python3-jinja2 python3-requests python3-coverage \
-    python3-nose
+    python3-pytest
--- a/prerequisites/prerequisites_opensuse_python3.sh
+++ b/prerequisites/prerequisites_opensuse_python3.sh
@ -6,5 +6,5 @@ sudo zypper -n install make git gcc python3-devel python3-setuptools \
    python3-matplotlib-qt4 \
    python3-PyYAML python3-Jinja2 \
    python3-requests \
-    python3-nose python3-coverage
+    python3-pytest python3-coverage

--- a/requirements-all.txt
+++ b/requirements-all.txt
@ -5,7 +5,7 @@ scipy>=1.0
 pyyaml
 matplotlib
 requests
-nose
+pytest
 jinja2
 pybtex
 PyQt5
--- a/requirements-conda-windows.txt
+++ b/requirements-conda-windows.txt
@ -8,6 +8,5 @@ scipy>=1.0
 pyyaml
 matplotlib
 requests
-nose
 jinja2
 pyqt
--- a/setup.cfg
+++ b/setup.cfg
@ -7,11 +7,6 @@ universal=1
 [build_ext]
 inplace=0

-[nosetests]
-verbosity=2
-cover-erase=1
-cover-package=pyrocko
-
 [coverage:report]
 exclude_lines =
    def __repr__